PPDB

The Plant Proteome Database

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AT3G16810.1   pumilio 24

Lab Annot. pumilio 24
Mapman: 35.1.12 not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G20250.1 11Arabidopsis thaliana8E-1029123428 (5)_
AT3G20250.3 11Arabidopsis thaliana1E-0929423420 (0)_
AT3G20250.2 11Arabidopsis thaliana1E-0929423420 (0)_
Os03g61560.1 7Oryza sativa061449673 (3)_
Os01g74030.1 7Oryza sativa2E-0826022430 (0)_
Os05g01910.1 7Oryza sativa3E-0827022450 (0)_
Zm00001eb063600_P003 agpv5Zea mays061448670 (0)_
GRMZM2G114692_P01 3.21Zea mays061448675 (5)_
v1_GRMZM2G114692_P01 4a53Zea mays0614486712 (12)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CPL(5) Ge1_WD40(2) Mga(1) PUF(5) PyrI(1)
TargetP: Cytoplasm (Class 3 C0.291; M0.153; S0.027; _0.719)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 641 aa (-cTP 572)
Molecular Weight 71.60 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help