PPDB

The Plant Proteome Database

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AT3G16680.1   DNA binding / DNA-directed RNA polymerase

Lab Annot.
Mapman: 27.3.50 RNA.regulation of transcription.General Transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22320.1 11Arabidopsis thaliana6E-237956738 (4)_
Os01g59140.1 7Oryza sativa5E-207950720 (0)_
Os04g41040.2 7Oryza sativa4E-177948692 (2)M
Os04g41040.1 7Oryza sativa8E-177948693 (3)M
v1_GRMZM2G476009_P01 4a53Zea mays2E-1879487020 (20)_
GRMZM2G476009_P01 3.21Zea mays2E-1879487014 (2)_
Zm00001eb369320_P001 agpv5Zea mays2E-187948700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RNA_pol_Rpb5_C(1)
TargetP: Secreted (Class 3 C0.001; M0.358; S0.909; _0.200)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 87 aa (-cTP 63)
Molecular Weight 10.24 kDA(-cTP )
PI 9.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help