PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G16670.1   Pollen Ole e 1 allergen and extensin family protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16660.1 11Arabidopsis thaliana1E-4717751681 (1)S
AT3G16660.2 11Arabidopsis thaliana2E-4717751680 (0)_
Os03g22210.1 7Oryza sativa1E-1010239580 (0)S
Os07g47750.1 7Oryza sativa1E-1011435524 (4)S
Os07g47760.1 7Oryza sativa6E-1010736480 (0)S
Zm00001eb111390_P001 agpv5Zea mays6E-0912433490 (0)S
GRMZM2G001247_P01 3.21Zea mays6E-0912433490 (0)S
v1_GRMZM2G001247_P01 4a53Zea mays6E-0912433490 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 1 C0.002; M0.009; S0.975; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 154 aa (-cTP 79)
Molecular Weight 15.87 kDA(-cTP )
PI 8.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help