PPDB

The Plant Proteome Database

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AT3G16540.1   DegP protease 11

Lab Annot. DEG11 protease (iAAA)
Mapman: 29.5.5.1.1* protein.degradation.serine protease.PA.S1
Curated Location mitochondria (Pubmed: 25161662 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16550.1 11Arabidopsis thaliana054660720 (0)M
AT5G36950.1 11Arabidopsis thaliana8E-17158347630 (0)M
AT1G65630.1 11Arabidopsis thaliana3E-16658247630 (0)M
Os05g34460.1 7Oryza sativa8E-16547251690 (0)C
Os06g12780.1 7Oryza sativa6E-10148039561 (1)C
Os02g50880.1 7Oryza sativa3E-10046540561 (1)C
GRMZM2G117615_P01 3.21Zea mays7E-16347950680 (0)C
Zm00001eb288180_P002 agpv5Zea mays7E-16347950680 (0)C
v1_GRMZM2G117615_P01 4a53Zea mays7E-16347950680 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PDZ(2) PDZ_2(2) PDZ_3(2) PDZ_6(2) Trypsin(1) Trypsin_2(1)
TargetP: Mitochondria (Class 2 C0.244; M0.845; S0.008; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 560 aa (-cTP 499)
Molecular Weight 63.69 kDA(-cTP )
PI 8.66(-cTP )

Experimental Evidence

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View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
36Detail       leaf [A. thaliana] plastid thylakoid membranewild-type

* For details about the exprimental sources click here.

Published Proteomics Data

14729914(thylakoid stripped)
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


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