PPDB

 The Plant Proteome Database

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AT3G16480.1   mitochondrial processing peptidase alpha subunit
Lab Annot. alpha-subunit mitochondrial processing peptidase (?-MPP2) dual-plastids&mito
Mapman: 29.5.7.4.1* protein.degradation.metalloprotease.ME.M16
Curated Location mitochondria (Pubmed: 22131051 )
plastid (Pubmed: 22131051 )

TAIR curated location: mitochondrial outer membrane & mitochondrion & mitochondrial inner membrane & mitochondrial matrix & mitochondrial intermembrane space14671022,14730085
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G51980.1 11Arabidopsis thaliana05038190165 (159)M
AT1G51980.2 11Arabidopsis thaliana0450818994 (88)M
AT3G02090.1 11Arabidopsis thaliana6E-574363052440 (414)M
Os01g53700.1 7Oryza sativa0501657820 (20)M
Os05g44916.1 7Oryza sativa049263780 (0)M
Os01g09560.1 7Oryza sativa0505557138 (38)M
Zm00001eb121370_P001 agpv5Zea mays050553700 (0)M
v1_GRMZM2G166646_P01 4a53Zea mays0505537065 (64)M
GRMZM2G166646_P01 3.21Zea mays0505537057 (57)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Peptidase_M16(1) Peptidase_M16_C(1)
TargetP: Mitochondria (Class 5 C0.575; M0.643; S0.003; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 499 aa (-cTP 434)
Molecular Weight 54.05 kDA(-cTP )
PI 6.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1614Detail       Natural Senescence leaf [A. thaliana]  
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2251Detail       seedlings [A. thaliana] total tissue wild-type
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
15276431(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
15276431(mitochondrial membranes-suspension cells)
17151019(vacuole - suspension cell)
19546170(mature pollen grains)
20118269(developing seeds)
17216043(leaf)
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help