PPDB

 The Plant Proteome Database

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AT3G16450.1   Mannose-binding lectin superfamily protein
Lab Annot. jacalin lectin protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G16450.2 11Arabidopsis thaliana030010010033 (33)_
AT3G16450.3 11Arabidopsis thaliana030010010033 (33)_
AT3G16440.2 11Arabidopsis thaliana2E-17130081890 (0)_
Os05g43240.3 7Oryza sativa8E-2832626450 (0)_
Os05g43240.2 7Oryza sativa1E-2732626450 (0)_
Os05g43240.1 7Oryza sativa1E-2732626450 (0)_
Zm00001eb369990_P001 agpv5Zea mays1E-3330929470 (0)_
v1_GRMZM2G170625_P01 4a53Zea mays8E-3132829460 (0)_
GRMZM2G170625_P02 3.21Zea mays4E-3032829460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: gp37_C(3) Jacalin(2)
TargetP: Cytoplasm (Class 2 C0.079; M0.125; S0.109; _0.918)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 300 aa (-cTP 275)
Molecular Weight 32.02 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1546Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 14617066(Nuclear proteome)
17828791(total leaf)
17293592(total seedlings û light and dark grown)
18998720(SA-induced secreted proteome (cell culture))
19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data

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