PPDB

PPDB	The Plant Proteome Database

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AT3G16380.1 poly(A) binding protein 6

Lab Annot.

Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34110.1 11 Arabidopsis thaliana 2E-108 440 42 60 422 (138) _
AT1G49760.2 11 Arabidopsis thaliana 1E-103 379 45 65 364 (128) S
AT1G49760.1 11 Arabidopsis thaliana 1E-103 379 45 65 383 (147) S
Os08g22354.2 7 Oryza sativa 2E-103 395 45 65 34 (34) S
Os08g22354.1 7 Oryza sativa 4E-103 395 45 65 34 (34) _
Os09g02700.1 7 Oryza sativa 4E-103 395 44 64 51 (51) C
Zm00001eb095540_P001 agpv5 Zea mays 2E-105 477 41 59 0 (0) _
v1_GRMZM2G102829_P02 4a53 Zea mays 2E-105 477 41 59 113 (113) _
GRMZM2G102829_P02 3.21 Zea mays 2E-105 477 41 59 171 (98) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4078(3) DUF4485(2) Limkain-b1(4) OB_RNB(3) RRM_1(4) RRM_3(2) RRM_5(4) RRM_7(3
TargetP:	Cytoplasm (Class 2 C0.061; M0.215; S0.028; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	537 aa (-cTP 463)
Molecular Weight	60.35 kDA(-cTP )
PI	9.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))

Comparative Proteomics Data