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AT3G16220.1 Putative eukaryotic LigT

Lab Annot.

Predicted eukaryotic LigT
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G16220.2 11 Arabidopsis thaliana 7E-124 172 97 98 0 (0) _
AT3G16230.13 11 Arabidopsis thaliana 7E-86 267 53 65 0 (0) _
AT3G16230.12 11 Arabidopsis thaliana 2E-85 267 53 65 0 (0) _
Os01g13100.3 7 Oryza sativa 5E-73 264 45 61 0 (0) C
Os01g13100.2 7 Oryza sativa 1E-72 264 45 61 0 (0) M
Os01g13100.1 7 Oryza sativa 1E-72 264 45 61 0 (0) M
Zm00001eb119210_P004 agpv5 Zea mays 8E-75 245 46 65 0 (0) _
Zm00001eb119210_P006 agpv5 Zea mays 8E-75 245 46 65 0 (0) _
v1_GRMZM2G093104_P03 4a53 Zea mays 8E-75 245 46 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2_5_RNA_ligase2(1) AKAP7_NLS(1) Corona_NS2A(1) DUF1967(2) Phage_TAC_13(1)
TargetP:	Cytoplasm (Class 3 C0.088; M0.171; S0.048; _0.760)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	257 aa (-cTP 195)
Molecular Weight	29.48 kDA(-cTP )
PI	9.27(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data