PPDB

The Plant Proteome Database

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AT3G16170.1   AMP-dependent synthetase and ligase family protein

Lab Annot. malonyl-CoA synthetase (Dual cytosol & mitochondria) (AAE13)
Mapman: 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl coa ligase
Curated Location cytosol (Pubmed: 26836315 22920973 )
mitochondria (Pubmed: 26836315 22920973 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G48990.1 11Arabidopsis thaliana2E-534853150426 (265)_
AT1G65060.1 11Arabidopsis thaliana2E-3760024411 (0)_
AT1G30520.2 11Arabidopsis thaliana2E-3652527420 (0)M
Os01g55590.1 7Oryza sativa0560637421 (21)_
Os04g58710.1 7Oryza sativa4E-50485315020 (20)M
Os02g08100.1 7Oryza sativa3E-37538244420 (20)_
Zm00001eb152410_P002 agpv5Zea mays055860740 (0)_
Zm00001eb152410_P003 agpv5Zea mays058859720 (0)M
Zm00001eb152410_P005 agpv5Zea mays055860740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMP-binding(1) AMP-binding_C(1)
TargetP: Chloroplast (Class 3 C0.732; M0.226; S0.007; _0.016)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 608 aa (-cTP 523)
Molecular Weight 67.16 kDA(-cTP 57.76)
PI 6.22(-cTP 5.74)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help