PPDB

PPDB	The Plant Proteome Database

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AT3G16110.1 PDI-like 1-6

Lab Annot.

ATPDIL1-6 (PDI-LIKE 1-6); thiol-disulfide exchange intermediate
Mapman: 21.1 redox.thioredoxin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G52260.1 11 Arabidopsis thaliana 0 534 77 86 0 (0) S
AT5G60640.2 11 Arabidopsis thaliana 6E-88 427 34 55 303 (175) S
AT5G60640.1 11 Arabidopsis thaliana 1E-87 436 34 55 356 (212) S
Os06g06790.1 7 Oryza sativa 1E-166 460 51 72 22 (22) S
Os02g01010.1 7 Oryza sativa 3E-84 446 34 54 19 (19) S
Os04g35600.1 7 Oryza sativa 2E-37 457 24 48 0 (0) S
Zm00001eb375710_P003 agpv5 Zea mays 3E-180 485 52 72 0 (0) S
GRMZM2G014076_P01 3.21 Zea mays 3E-180 485 52 72 0 (0) S
GRMZM2G014076_P02 3.21 Zea mays 3E-180 485 52 72 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AhpC-TSA(2) Calsequestrin(1) CBAH(1) OST3_OST6(3) Thioredoxin(3) Thioredoxin_2(2
TargetP:	Secreted (Class 1 C0.004; M0.053; S0.966; _0.071)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	534 aa (-cTP 498)
Molecular Weight	59.57 kDA(-cTP )
PI	4.93(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2296	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
16618929(ER-LOPIT-callus)
18599647(seed proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data