PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G16050.1 pyridoxine biosynthesis 1.2

Lab Annot.

PDX1.2 (Vitamine b6 synthesis)
Mapman: 18.20* Co-factor and vitamine metabolism.vitamin b6

Curated Location

cytosol (Pubmed: 16157873 )

TAIR curated location: cytosol16157873

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G01410.1 11 Arabidopsis thaliana 7E-144 306 63 82 260 (132) _
AT5G01410.2 11 Arabidopsis thaliana 7E-144 306 63 82 0 (0) _
AT2G38230.1 11 Arabidopsis thaliana 9E-138 306 61 80 343 (195) _
Os07g01020.1 7 Oryza sativa 2E-139 314 60 79 32 (32) _
Os11g48080.1 7 Oryza sativa 4E-139 297 63 80 13 (13) _
Os10g01080.1 7 Oryza sativa 2E-134 298 62 80 19 (19) _
Zm00001eb298350_P001 agpv5 Zea mays 6E-136 313 59 77 0 (0) _
GRMZM2G120652_P01 3.21 Zea mays 2E-134 315 59 77 131 (62) C
v1_GRMZM2G120652_P01 4a53 Zea mays 2E-134 315 59 77 81 (81) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DHO_dh(1) Dus(2) FMN_dh(2) His_biosynth(2) IGPS(2) NanE(2) NMO(2) SOR_SNZ(1) Thi
TargetP:	Cytoplasm (Class 2 C0.171; M0.024; S0.009; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	314 aa (-cTP 215)
Molecular Weight	33.84 kDA(-cTP )
PI	5.45(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
429	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data