PPDB

The Plant Proteome Database

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AT3G15780.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52550.1 11Arabidopsis thaliana1E-1211345610 (0)C
Os01g29740.1 7Oryza sativa3E-094845600 (0)C
v1_GRMZM2G428356_P01 4a53Zea mays1E-084845600 (0)C
Zm00001eb221290_P001 agpv5Zea mays1E-084845600 (0)C
GRMZM2G428356_P01 3.21Zea mays1E-084845600 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 4 C0.576; M0.278; S0.042; _0.088)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 117 aa (-cTP 73)
Molecular Weight 12.97 kDA(-cTP 7.90)
PI 10.72(-cTP 9.99)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help