PPDB

The Plant Proteome Database

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AT3G15690.1   Single hybrid motif superfamily protein

Lab Annot. putative biotin carboxyl carrier protein (BCCP)
Mapman: 11.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation
Curated Location envelope-inner-peripheral-stromal-side (Pubmed: 23198870 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15690.3 11Arabidopsis thaliana2E-1752431001000 (0)C
AT3G15690.2 11Arabidopsis thaliana4E-172240100100121 (96)C
AT1G52670.1 11Arabidopsis thaliana4E-1102516577254 (155)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Biotin_lipoyl(1) Biotin_lipoyl_2(2) RnfC_N(2)
TargetP: Chloroplast (Class 2 C0.706; M0.074; S0.019; _0.076)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 247 aa (-cTP 193) (-lTP 109)
Molecular Weight 26.44 kDA(-cTP 20.50)(-lTP 11.57)
PI 9.36(-cTP 6.63)(-lTP 8.870)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1460Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 3)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1945Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2218Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep
2221Detail       Total soluble [A. thaliana] Total soluble proteins cGEP strep

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
21173025(root proteome)

Comparative Proteomics Data


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