PPDB

The Plant Proteome Database

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AT3G15680.1   Ran BP2/NZF zinc finger-like superfamily protein

Lab Annot. zinc finger (Ran-binding) protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15680.2 11Arabidopsis thaliana2E-1151641001000 (0)M
AT5G25490.1 11Arabidopsis thaliana1E-5717556650 (0)M
AT5G25490.2 11Arabidopsis thaliana1E-5717556650 (0)M
Os02g10920.2 7Oryza sativa1E-4616560665 (5)M
Os02g10920.1 7Oryza sativa1E-4616560665 (5)M
Os02g10920.5 7Oryza sativa1E-4616560665 (5)M
Zm00001eb205550_P001 agpv5Zea mays3E-4617550570 (0)_
Zm00001eb205550_P005 agpv5Zea mays3E-4617550570 (0)_
Zm00001eb205550_P004 agpv5Zea mays3E-4617550570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF35_N(2) DZR(2) DZR_2(3) zf-RanBP(3)
TargetP: Mitochondria (Class 5 C0.417; M0.505; S0.014; _0.184)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 164 aa (-cTP 79)
Molecular Weight 17.56 kDA(-cTP )
PI 8.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2287Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19888209(leaves)
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help