PPDB

PPDB	The Plant Proteome Database

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AT3G15610.1 Transducin/WD40 repeat-like superfamily protein

Lab Annot.

transducin protein / WD-40 repeat protein
Mapman: 29.4 protein.postranslational modification

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G52730.2 11 Arabidopsis thaliana 0 342 91 94 38 (12) _
AT1G52730.1 11 Arabidopsis thaliana 0 342 91 94 38 (12) _
AT1G15470.1 11 Arabidopsis thaliana 0 333 76 84 1 (1) _
Os06g39760.1 7 Oryza sativa 0 334 80 88 4 (4) _
Os02g11060.1 7 Oryza sativa 0 341 78 86 0 (0) _
Os08g21660.1 7 Oryza sativa 7E-36 318 29 48 30 (30) M
Zm00001eb276870_P002 agpv5 Zea mays 0 338 80 89 0 (0) _
v1_GRMZM2G105398_P01 4a53 Zea mays 0 338 80 89 34 (34) _
Zm00001eb276870_P001 agpv5 Zea mays 0 357 73 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(5) eIF2A(3) Ge1_WD40(3) PAX(1) WD40(7) WD40_like(2)
TargetP:	Cytoplasm (Class 3 C0.073; M0.207; S0.163; _0.681)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	341 aa (-cTP 335)
Molecular Weight	37.36 kDA(-cTP )
PI	6.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2290	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2301	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data