PPDB

PPDB	The Plant Proteome Database

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AT3G15590.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G15590.2 11 Arabidopsis thaliana 0 610 100 100 0 (0) M
AT1G80270.1 11 Arabidopsis thaliana 3E-180 611 44 67 0 (0) M
AT1G80270.5 11 Arabidopsis thaliana 3E-180 611 44 67 0 (0) M
Os01g17320.1 7 Oryza sativa 4E-152 571 43 65 0 (0) M
Os12g07260.1 7 Oryza sativa 4E-149 571 42 65 1 (1) M
Os07g12140.1 7 Oryza sativa 6E-113 441 39 63 0 (0) M
Zm00001eb129090_P001 agpv5 Zea mays 3E-144 564 41 62 0 (0) M
v1_GRMZM2G130366_P01 4a53 Zea mays 3E-144 564 41 62 2 (2) M
GRMZM2G130366_P01 3.21 Zea mays 3E-144 564 41 62 3 (3) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3067(1) PPR(7) PPR_1(5) PPR_2(8) PPR_3(9) PPR_long(3) RPN7(3) TPR_14(3) TPR_1
TargetP:	Mitochondria (Class 3 C0.064; M0.745; S0.010; _0.195)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	610 aa (-cTP 580)
Molecular Weight	69.39 kDA(-cTP )
PI	8.50(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

15276431(Mitochondrial proteome)
15276431(mitochondrial membranes-suspension cells)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
20733066(phosphoproteome-ABA-leaf)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data