PPDB

 The Plant Proteome Database

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AT3G15580.1   Ubiquitin-like superfamily protein
Lab Annot. ATG8i - (ATG8/12 conjugation pathway)
Mapman: 29.5.2 protein.degradation.autophagy
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G06420.1 11Arabidopsis thaliana1E-5611567840 (0)_
AT2G05630.1 11Arabidopsis thaliana1E-4411554770 (0)_
AT4G16520.2 11Arabidopsis thaliana3E-4411357761 (1)_
Os11g01010.1 7Oryza sativa1E-5511569850 (0)_
Os07g32800.1 7Oryza sativa5E-4511360760 (0)M
Os07g32800.2 7Oryza sativa5E-4511360760 (0)M
Zm00001eb105850_P001 agpv5Zea mays3E-4611360770 (0)_
Zm00001eb105850_P002 agpv5Zea mays3E-4611360770 (0)_
GRMZM2G419694_P04 3.21Zea mays3E-44113577618 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APG12(1) Atg8(1)
TargetP: Cytoplasm (Class 2 C0.055; M0.110; S0.053; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 115 aa (-cTP 21)
Molecular Weight 13.25 kDA(-cTP )
PI 7.70(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help