PPDB

The Plant Proteome Database

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AT3G15480.1   fiber (DUF1218)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52910.1 11Arabidopsis thaliana6E-10717581910 (0)S
AT4G27435.1 11Arabidopsis thaliana1E-7517361760 (0)S
AT1G61065.1 11Arabidopsis thaliana1E-5716856730 (0)S
Os07g27810.1 7Oryza sativa9E-64175637719 (19)S
Os04g58160.1 7Oryza sativa1E-5717451710 (0)S
Os04g58160.3 7Oryza sativa1E-5717451710 (0)S
Zm00001eb096510_P001 agpv5Zea mays2E-6117562750 (0)S
GRMZM5G872070_P01 3.21Zea mays2E-6117562758 (8)S
v1_GRMZM2G396540_P01 4a53Zea mays9E-6116963770 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Abhydrolase_9_N(2) Baculo_11_kDa(2) DUF1218(2)
TargetP: Secreted (Class 1 C0.006; M0.006; S0.986; _0.126)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 175 aa (-cTP 107)
Molecular Weight 19.42 kDA(-cTP )
PI 8.72(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


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