PPDB

 The Plant Proteome Database

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AT3G15410.2   Leucine-rich repeat (LRR) family protein
Lab Annot. leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15410.1 11Arabidopsis thaliana0590989820 (4)M
AT3G24240.1 11Arabidopsis thaliana5E-3254730470 (0)S
AT2G33170.2 11Arabidopsis thaliana1E-2853030470 (0)S
Os02g58030.1 7Oryza sativa059262784 (4)_
Os04g48760.1 7Oryza sativa5E-3451630480 (0)S
Os08g40090.1 7Oryza sativa1E-3230534527 (7)_
Zm00001eb259320_P001 agpv5Zea mays059063780 (0)_
Zm00001eb259320_P003 agpv5Zea mays059263780 (0)_
Zm00001eb259320_P004 agpv5Zea mays059762770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: LRR_1(17) LRR_4(12) LRR_8(10) LRR_9(7)
TargetP: Cytoplasm (Class 4 C0.036; M0.381; S0.046; _0.648)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 590 aa (-cTP 584)
Molecular Weight 64.85 kDA(-cTP )
PI 5.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help