PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G15410.1   Leucine-rich repeat (LRR) family protein

Lab Annot. leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15410.2 11Arabidopsis thaliana0590989818 (3)_
AT3G24240.1 11Arabidopsis thaliana4E-3153930470 (0)S
AT2G33170.2 11Arabidopsis thaliana1E-2853030470 (0)S
Os02g58030.1 7Oryza sativa058662794 (4)_
Os04g48760.1 7Oryza sativa4E-3451630480 (0)S
Os08g40090.1 7Oryza sativa1E-3230534527 (7)_
Zm00001eb259320_P001 agpv5Zea mays058464790 (0)_
Zm00001eb259320_P003 agpv5Zea mays058663790 (0)_
Zm00001eb259320_P004 agpv5Zea mays059163780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRR_1(17) LRR_4(13) LRR_8(11) LRR_9(7)
TargetP: Mitochondria (Class 5 C0.049; M0.554; S0.023; _0.457)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 584 aa (-cTP 578)
Molecular Weight 64.10 kDA(-cTP )
PI 6.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help