PPDB

PPDB	The Plant Proteome Database

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AT3G15290.1 3-hydroxyacyl-CoA dehydrogenase family protein

Lab Annot.

3-hydroxybutyryl-CoA dehydrogenase
Mapman: 24.3 Biodegradation of Xenobiotics.3-hydroxybutyryl-CoA dehydrogenase

Curated Location

peroxisome (Pubmed: 17951448 21472859 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G15290.2 11 Arabidopsis thaliana 6E-174 233 99 100 0 (0) _
AT3G06860.1 11 Arabidopsis thaliana 3E-35 283 30 50 177 (126) _
AT4G29010.1 11 Arabidopsis thaliana 7E-35 285 28 51 358 (249) _
Os01g58380.1 7 Oryza sativa 9E-154 291 70 83 0 (0) S
Os02g17390.1 7 Oryza sativa 2E-34 283 30 48 44 (44) _
Os05g29880.1 7 Oryza sativa 4E-34 290 29 50 0 (0) _
Zm00001eb369580_P001 agpv5 Zea mays 2E-152 292 68 83 0 (0) C
GRMZM2G106250_P01 3.21 Zea mays 2E-152 292 68 83 1 (1) C
v1_GRMZM2G106250_P01 4a53 Zea mays 2E-152 292 68 83 2 (2) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-Hacid_dh_C(1) 3HCDH(2) 3HCDH_N(1) adh_short_C2(1) DAO(2) F420_oxidored(1) GIDA
TargetP:	Cytoplasm (Class 4 C0.078; M0.043; S0.261; _0.481)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	294 aa (-cTP 252)
Molecular Weight	31.69 kDA(-cTP )
PI	6.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1113	Detail								[A. thaliana]	control for RARE-1 co-IP	wild-type
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2274	Detail								seedlings [A. thaliana]	total tissue	wild-type
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17951448(peroxisome (leaves))
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19329564(peroxisomes (leaf))
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data