PPDB

PPDB	The Plant Proteome Database

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AT3G15180.1 ARM repeat superfamily protein

Lab Annot.

ARM repeat
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G15180.2 11 Arabidopsis thaliana 0 551 94 94 55 (12) _
Os05g48340.1 7 Oryza sativa 6E-145 518 42 64 1 (1) _
Os05g48340.2 7 Oryza sativa 1E-137 481 42 64 1 (1) _
Os05g48340.3 7 Oryza sativa 4E-109 417 41 63 1 (1) _
GRMZM2G086132_P01 3.21 Zea mays 7E-147 518 43 64 49 (4) _
Zm00001eb295460_P001 agpv5 Zea mays 7E-147 518 43 64 0 (0) _
v1_GRMZM2G086132_P01 4a53 Zea mays 7E-147 518 43 64 3 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HEAT(5) HEAT_2(3) HEAT_EZ(4) Proteasom_PSMB(1)
TargetP:	Cytoplasm (Class 3 C0.043; M0.059; S0.357; _0.795)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	519 aa (-cTP 500)
Molecular Weight	56.69 kDA(-cTP )
PI	5.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2289	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
19546170(mature pollen grains)
20706207(cell cycle interactome (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data