PPDB

The Plant Proteome Database

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AT3G15130.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13650.1 11Arabidopsis thaliana1E-15668337551 (1)_
AT4G33170.1 11Arabidopsis thaliana9E-15566637590 (0)C
AT4G18750.1 11Arabidopsis thaliana6E-15366837591 (0)C
Os04g58980.1 7Oryza sativa067949660 (0)M
Os05g12130.1 7Oryza sativa4E-15565637590 (0)C
Os03g56400.1 7Oryza sativa1E-15371935530 (0)_
v1_GRMZM2G447090_P01 4a53Zea mays069448660 (0)M
Zm00001eb076040_P001 agpv5Zea mays069448660 (0)M
GRMZM2G447090_P01 3.21Zea mays069448660 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: dCMP_cyt_deam_1(1) DYW_deaminase(1) PPR(12) PPR_1(12) PPR_2(10) PPR_3(5) PPR_lon
TargetP: Cytoplasm (Class 5 C0.015; M0.485; S0.035; _0.504)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 689 aa (-cTP 675)
Molecular Weight 77.04 kDA(-cTP )
PI 7.95(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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