PPDB

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AT3G15130.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13650.1 11 Arabidopsis thaliana 1E-156 683 37 55 1 (1) _
AT4G33170.1 11 Arabidopsis thaliana 9E-155 666 37 59 0 (0) C
AT4G18750.1 11 Arabidopsis thaliana 6E-153 668 37 59 0 (0) C
Os04g58980.1 7 Oryza sativa 0 679 49 66 0 (0) M
Os05g12130.1 7 Oryza sativa 4E-155 656 37 59 0 (0) C
Os03g56400.1 7 Oryza sativa 1E-153 719 35 53 0 (0) _
v1_GRMZM2G447090_P01 4a53 Zea mays 0 694 48 66 0 (0) M
Zm00001eb076040_P001 agpv5 Zea mays 0 694 48 66 0 (0) M
GRMZM2G447090_P01 3.21 Zea mays 0 694 48 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	dCMP_cyt_deam_1(1) DYW_deaminase(1) PPR(12) PPR_1(12) PPR_2(10) PPR_3(5) PPR_lon
TargetP:	Cytoplasm (Class 5 C0.015; M0.485; S0.035; _0.504)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	689 aa (-cTP 675)
Molecular Weight	77.04 kDA(-cTP )
PI	7.95(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data