PPDB

The Plant Proteome Database

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AT3G15110.1   transmembrane protein

Lab Annot. unknown protein (plastid?)
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 23198870 )

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g20490.1 7Oryza sativa1E-54185607534 (34)M
Zm00001eb235270_P001 agpv5Zea mays9E-5120057730 (0)C
v1_GRMZM2G015033_P01 4a53Zea mays9E-51200577332 (32)C
GRMZM2G015033_P01 3.21Zea mays9E-51200577393 (93)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2254(1) DUF3082(2) T4SS_pilin(3)
TargetP: Mitochondria (Class 2 C0.132; M0.795; S0.005; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 3 TMs
TAT position:
Length 266 aa (-cTP 225)
Molecular Weight 28.61 kDA(-cTP )
PI 6.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
105Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1675Detail       Rosettes [A. thaliana]  
1676Detail       Rosettes [A. thaliana]  
1707Detail        [A. thaliana] sht1
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
19995723(chloroplast reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help