PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G14860.2   NHL domain-containing protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G14860.1 11Arabidopsis thaliana049399990 (0)C
AT1G70280.2 11Arabidopsis thaliana1E-7235140590 (0)S
AT1G70280.1 11Arabidopsis thaliana4E-7132142590 (0)_
Os02g13950.1 7Oryza sativa1E-14648352670 (0)S
Os02g49770.1 7Oryza sativa2E-7535240580 (0)S
Os06g15820.1 7Oryza sativa4E-7135939570 (0)M
Zm00001eb239070_P001 agpv5Zea mays3E-13348950630 (0)S
v1_GRMZM2G026490_P01 4a53Zea mays3E-13348950630 (0)S
GRMZM2G026490_P01 3.21Zea mays3E-13348950630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: NHL(3)
TargetP: Chloroplast (Class 5 C0.405; M0.035; S0.388; _0.051)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 493 aa (-cTP 443)
Molecular Weight 54.96 kDA(-cTP 49.35)
PI 6.98(-cTP 6.71)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help