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AT3G14790.1 rhamnose biosynthesis 3

Lab Annot.

RHM3 (RHAMNOSE BIOSYNTHESIS 3); catalytic
Mapman: 10.1.10 cell wall.precursor synthesis.RHM; 26.57* misc.alpha/beta-Hydrolase family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G14790.2 11 Arabidopsis thaliana 0 664 100 100 0 (0) _
AT1G53500.1 11 Arabidopsis thaliana 0 665 91 95 55 (24) _
AT1G78570.1 11 Arabidopsis thaliana 0 669 85 92 174 (77) _
Os03g17000.1 6 Oryza sativa 0 672 82 90 11 (11) _
Os03g17000.3 7 Oryza sativa 0 672 82 90 22 (22) _
Os03g17000.2 7 Oryza sativa 0 672 82 90 22 (22) _
v1_GRMZM2G166767_P01 4a53 Zea mays 0 669 83 90 25 (24) _
v1_GRMZM2G166767_P02 4a53 Zea mays 0 669 83 90 25 (24) _
Zm00001eb397570_P001 agpv5 Zea mays 0 669 83 90 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(2) adh_short(3) DUF3269(1) Epimerase(2) GDP_Man_Dehyd(2) NAD_binding_1
TargetP:	Cytoplasm (Class 4 C0.012; M0.242; S0.166; _0.490)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	664 aa (-cTP 627)
Molecular Weight	74.91 kDA(-cTP )
PI	6.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1931	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(cell cycle interactome (cell culture))
19292762(Ubiquitin-affinity seedling (10 d))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data