PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G14600.1   Ribosomal protein L18ae/LX family protein

Lab Annot. 60S ribosomal protein L18A (RPL18aC)
Mapman: 29.2.1.2.2.518 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L18A
Curated Location cytosol

TAIR curated location: cytosolic ribosome (sensu Eukaryota)15821981
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34480.2 11Arabidopsis thaliana6E-12317892940 (0)M
AT2G34480.1 11Arabidopsis thaliana8E-1231789294224 (163)M
AT1G29965.1 11Arabidopsis thaliana1E-118178889211 (6)_
Os05g49030.1 7Oryza sativa2E-117178889335 (35)M
Os01g54870.1 7Oryza sativa2E-117178889226 (26)M
Os01g47660.1 7Oryza sativa3E-117178889235 (35)M
Zm00001eb157400_P001 agpv5Zea mays1E-11517887920 (0)M
AC230013.2_FGP007 3.21Zea mays1E-115178879254 (50)M
v1_AC230013.2_FGP007 4a53Zea mays1E-115178879247 (47)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_L18A(1)
TargetP: Cytoplasm (Class 5 C0.028; M0.561; S0.039; _0.681)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 178 aa (-cTP 151)
Molecular Weight 21.31 kDA(-cTP )
PI 10.35(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
1757Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

15821981(crude&pure 80S ribosome)
15734919(80S cytolic ribosomes)
17934214(cytosolic ribosome)
17432890(leaf total membranes)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help