PPDB

PPDB	The Plant Proteome Database

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AT3G14450.1 CTC-interacting domain 9

Lab Annot.

Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G53650.2 11 Arabidopsis thaliana 2E-154 338 69 77 0 (0) _
AT1G53650.1 11 Arabidopsis thaliana 1E-145 339 68 75 0 (0) _
AT1G32790.1 11 Arabidopsis thaliana 1E-123 276 64 76 0 (0) C
Os01g11120.1 7 Oryza sativa 3E-123 278 64 75 1 (1) _
Os08g02330.1 7 Oryza sativa 3E-113 275 61 70 0 (0) _
Os06g35030.3 7 Oryza sativa 1E-108 303 59 70 0 (0) S
Zm00001eb120320_P001 agpv5 Zea mays 1E-115 295 58 72 0 (0) _
GRMZM2G051043_P01 3.21 Zea mays 1E-115 295 58 72 3 (2) _
v1_GRMZM2G051043_P01 4a53 Zea mays 1E-115 295 58 72 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1866(2) PAM2(1) Phage_coat(1) RRM_1(2) RRM_occluded(2)
TargetP:	Cytoplasm (Class 2 C0.119; M0.101; S0.187; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	327 aa (-cTP 231)
Molecular Weight	36.55 kDA(-cTP )
PI	6.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data