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AT3G14390.1
Pyridoxal-dependent decarboxylase family protein
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| Lab Annot. |
diaminopimelate decarboxylase, DAP carboxylase
Mapman: 13.1.3.5.5 amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase |
| Curated Location |
plastid (supported by in-house exprements)
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
Ala_racemase_N(1) Orn_Arg_deC_N(1) Orn_DAP_Arg_deC(1) |
| TargetP: |
Chloroplast (Class 1 C0.961; M0.098; S0.004; _0.024) |
| Predotar: |
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| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
484 aa (-cTP 436) |
| Molecular Weight |
53.56 kDA(-cTP 48.26) |
| PI |
6.51(-cTP 5.62) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 272 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | clpr2-1 |
| 303 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 311 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr2-1:R2-his6 |
| 351 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 356 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 541 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) >1 MDa stroma | wild-type |
| 544 | Detail | | | | | | | | leaf [A. thaliana] | stroma (FPLC) <600 kDa (LMA) | wild-type |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 1127 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2k3 |
| 1345 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 1) |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1409 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | wild-type |
| 1412 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | clpr2-1 |
| 1414 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue -114 rep1tR2 | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1424 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1xprep2xt1xt2 (rep. 1) |
| 1455 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 1) |
| 1456 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1485 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1530 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | wild-type (rep. 1) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 1634 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wild-type |
| 1871 | Detail | | | | | | | | Total leaf [A. thaliana] | Stroma | wild-type |
| 1872 | Detail | | | | | | | | Total leaf [A. thaliana] | Stroma | wild-type |
| 1933 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast | wild-type |
| 1936 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast | Prep1_Prep2 |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1942 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1945 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1946 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | wild-type |
| 1947 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 1949 | Detail | | | | | | | | leaf [A. thaliana] | stroma ClpS stroma | clpS |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2112 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2113 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2114 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2115 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | cGep |
| 2182 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2183 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
20423899(chloroplast)
19888209(80S polysomal fraction)
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21166475(cytosolic-fractions-crude)
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Comparative Proteomics Data
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