PPDB

The Plant Proteome Database

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AT3G14330.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G46790.1 11Arabidopsis thaliana2E-14765436571 (1)C
AT3G13770.1 11Arabidopsis thaliana1E-14458239600 (0)M
AT3G57430.1 11Arabidopsis thaliana3E-14359538610 (0)C
Os05g30710.1 7Oryza sativa4E-14356139570 (0)C
Os06g41040.1 7Oryza sativa1E-14258838610 (0)_
Os10g30760.1 7Oryza sativa3E-13258137570 (0)M
v1_GRMZM2G380195_P06 4a53Zea mays1E-14168935556 (6)C
GRMZM2G380195_P06 3.21Zea mays1E-141689355512 (12)C
Zm00001eb124470_P001 agpv5Zea mays1E-14066236560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DYW_deaminase(1) PPR(10) PPR_1(7) PPR_2(8) PPR_3(6) PPR_long(3) TPR_14(4)
TargetP: Cytoplasm (Class 5 C0.016; M0.646; S0.023; _0.768)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 710 aa (-cTP 686)
Molecular Weight 79.77 kDA(-cTP )
PI 8.29(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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