PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G14150.1   Aldolase-type TIM barrel family protein

Lab Annot. glycolate oxidase
Mapman: 1.2.2 PS.photorespiration.glycolate oxydase
Curated Location peroxisome (Pubmed: 21472859 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G14150.2 11Arabidopsis thaliana03631001002 (2)_
AT3G14130.1 11Arabidopsis thaliana036391962 (1)_
AT3G14130.3 11Arabidopsis thaliana036391960 (0)_
Os07g42440.2 7Oryza sativa3E-18036064810 (0)_
Os07g42440.3 7Oryza sativa3E-18036064810 (0)_
Os07g42440.1 7Oryza sativa3E-18036064810 (0)_
v1_GRMZM2G148194_P05 4a53Zea mays6E-17436164810 (0)_
GRMZM2G148194_P05 3.21Zea mays6E-17436164810 (0)_
Zm00001eb109300_P002 agpv5Zea mays6E-17436164810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DHDPS(2) DHO_dh(2) FMN_dh(1) G3P_antiterm(2) Glu_synthase(1) His_biosynth(3) IMP
TargetP: Cytoplasm (Class 1 C0.046; M0.093; S0.058; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 363 aa (-cTP 357)
Molecular Weight 40.13 kDA(-cTP )
PI 8.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help