PPDB

PPDB	The Plant Proteome Database

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AT3G14040.1 Pectin lyase-like superfamily protein

Lab Annot.

Pectin lyase-like
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G07850.1 11 Arabidopsis thaliana 0 445 97 99 0 (0) S
AT5G48140.1 11 Arabidopsis thaliana 3E-123 364 49 67 0 (0) S
AT3G07840.1 11 Arabidopsis thaliana 9E-121 381 48 64 1 (1) S
Os06g35320.1 7 Oryza sativa 6E-100 369 43 60 0 (0) S
Os06g35370.1 7 Oryza sativa 6E-100 369 43 60 0 (0) S
Os08g23790.1 7 Oryza sativa 4E-99 377 42 59 0 (0) S
GRMZM2G153666_P02 3.21 Zea mays 1E-105 377 42 60 0 (0) S
Zm00001eb275910_P001 agpv5 Zea mays 1E-105 377 42 60 0 (0) S
v1_GRMZM2G153666_P02 4a53 Zea mays 1E-105 377 42 60 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Glyco_hydro_28(1) NosD(1) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.011; M0.019; S0.984; _0.038)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	445 aa (-cTP 427)
Molecular Weight	45.70 kDA(-cTP )
PI	8.63(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16247729(mature Pollen)
18436743(specific to flower)
19546170(mature pollen grains)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data