PPDB

The Plant Proteome Database

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AT3G13845.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13845.2 11Arabidopsis thaliana2E-40701001000 (0)S
GRMZM2G152808_P01 3.21Zea mays7E-1364647621 (21)C
v1_GRMZM2G152808_P01 4a53Zea mays7E-1364647616 (16)C
Zm00001eb270650_P001 agpv5Zea mays1E-127061740 (0)S

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Kinocilin(1) NDUF_B12(2)
TargetP: Secreted (Class 3 C0.009; M0.254; S0.849; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon:
TAT position:
Length 70 aa (-cTP 30)
Molecular Weight 6.68 kDA(-cTP )
PI 10.47(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help