PPDB

The Plant Proteome Database

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AT3G13790.1   Glycosyl hydrolases family 32 protein

Lab Annot.
Mapman: 2.2.1.3.2 major CHO metabolism.degradation.sucrose.invertases.cell wall
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13790.2 11Arabidopsis thaliana0584999941 (1)S
AT3G13790.3 11Arabidopsis thaliana05141001000 (0)M
AT3G13790.5 11Arabidopsis thaliana05141001000 (0)M
Os04g33720.1 7Oryza sativa055254710 (0)S
Os04g33740.1 7Oryza sativa056954684 (4)S
Os09g08072.1 7Oryza sativa057048660 (0)S
GRMZM2G123633_P01 3.21Zea mays057754718 (8)S
v1_GRMZM2G123633_P01 4a53Zea mays057754718 (5)S
Zm00001eb421960_P001 agpv5Zea mays057754710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_32C(1) Glyco_hydro_32N(1)
TargetP: Secreted (Class 1 C0.006; M0.062; S0.969; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 584 aa (-cTP 557)
Molecular Weight 66.28 kDA(-cTP )
PI 9.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
18796151(cell wall (hypocotyl))
19334764(plasma membrane (cell culture))
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21325567(root-proteome (wt & det3))
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help