PPDB

PPDB	The Plant Proteome Database

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AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13770.2 11 Arabidopsis thaliana 0 628 94 94 0 (0) M
AT3G24000.1 11 Arabidopsis thaliana 1E-162 574 40 62 0 (0) M
AT3G57430.1 11 Arabidopsis thaliana 9E-159 619 40 60 0 (0) C
Os06g41040.1 7 Oryza sativa 0 586 61 79 0 (0) _
Os10g30760.1 7 Oryza sativa 1E-169 603 40 62 0 (0) M
Os04g14130.3 7 Oryza sativa 7E-154 623 39 58 0 (0) _
v1_GRMZM2G143377_P01 4a53 Zea mays 0 579 59 77 0 (0) M
GRMZM2G143377_P01 3.21 Zea mays 0 579 59 77 0 (0) M
Zm00001eb388320_P001 agpv5 Zea mays 0 579 59 77 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) BTAD(3) DYW_deaminase(1) PPR(10) PPR_1(11) PPR_2(9) PPR_3(7) PPR_long(3)
TargetP:	Mitochondria (Class 4 C0.062; M0.561; S0.228; _0.170)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	628 aa (-cTP 585)
Molecular Weight	70.74 kDA(-cTP )
PI	7.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data