PPDB

The Plant Proteome Database

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AT3G13720.1   PRA1 (Prenylated rab acceptor) family protein

Lab Annot. PRA1 (Prenylated rab acceptor) protein
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13710.1 11Arabidopsis thaliana2E-10618880884 (1)C
AT1G55190.1 11Arabidopsis thaliana4E-9618971851 (0)_
AT1G17700.1 11Arabidopsis thaliana2E-4317748660 (0)_
Os01g10010.1 7Oryza sativa1E-3715054720 (0)C
Os01g10010.2 7Oryza sativa1E-3715054720 (0)C
Os05g11120.1 7Oryza sativa2E-3618248640 (0)C
Zm00001eb120910_P002 agpv5Zea mays2E-3817954690 (0)C
Zm00001eb120910_P001 agpv5Zea mays2E-3817954690 (0)C
GRMZM2G050890_P02 3.21Zea mays2E-38179546931 (24)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CrgA(1) DUF4389(2) Flavi_NS2B(2) PRA1(1) TraL(2)
TargetP: Cytoplasm (Class 5 C0.405; M0.154; S0.034; _0.525)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 188 aa (-cTP 158)
Molecular Weight 21.12 kDA(-cTP )
PI 9.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21325567(root-proteome (wt & det3))
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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