PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G13610.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot.
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55290.1 11Arabidopsis thaliana035777890 (0)_
AT3G12900.1 11Arabidopsis thaliana2E-11735447680 (0)_
AT5G12270.1 11Arabidopsis thaliana2E-9935343640 (0)_
Os01g61610.3 7Oryza sativa9E-6835036560 (0)_
Os01g61610.1 7Oryza sativa9E-6835036560 (0)_
Os01g61610.2 7Oryza sativa9E-6835036560 (0)_
Zm00001eb265150_P001 agpv5Zea mays7E-6734236530 (0)_
v1_GRMZM2G117246_P01 4a53Zea mays4E-6436633520 (0)_
GRMZM2G117246_P01 3.21Zea mays4E-6436633520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1) Trm56(1)
TargetP: Cytoplasm (Class 2 C0.168; M0.107; S0.143; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 361 aa (-cTP 325)
Molecular Weight 40.67 kDA(-cTP )
PI 5.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help