PPDB

The Plant Proteome Database

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AT3G13560.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13560.5 11Arabidopsis thaliana05051001000 (0)S
AT3G13560.4 11Arabidopsis thaliana05051001000 (0)S
AT3G13560.3 11Arabidopsis thaliana05051001007 (6)S
Os07g38930.1 7Oryza sativa046355730 (0)S
Os07g38930.3 7Oryza sativa046355730 (0)S
Os07g38930.4 7Oryza sativa046355730 (0)S
v1_GRMZM2G072526_P02 4a53Zea mays046256740 (0)S
v1_GRMZM2G072526_P01 4a53Zea mays046256740 (0)S
Zm00001eb107530_P001 agpv5Zea mays049253710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 1 C0.004; M0.023; S0.982; _0.025)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 505 aa (-cTP 439)
Molecular Weight 54.42 kDA(-cTP )
PI 5.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
WallDB-E.Jamet(cell wall reference proteome)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


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