PPDB

 The Plant Proteome Database

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AT3G13520.1   arabinogalactan protein 12
Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56540.1 11Arabidopsis thaliana2E-196061760 (0)S
AT1G55330.1 11Arabidopsis thaliana1E-156070780 (0)S
AT4G26320.1 11Arabidopsis thaliana4E-136066800 (0)S

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Conotoxin(2) DUF2749(1) RhodobacterPufX(1) Trep_dent_lipo(1)
TargetP: Secreted (Class 1 C0.008; M0.020; S0.994; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 60 aa (-cTP 34)
Molecular Weight 6.09 kDA(-cTP )
PI 4.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help