PPDB

PPDB	The Plant Proteome Database

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AT3G13460.4 evolutionarily conserved C-terminal region 2

Lab Annot.

ECT2; protein binding - cytosol & nucleus
Mapman: 35.2 not assigned.unknown

Curated Location

cytosol (Pubmed: 15610358 )
nucleus (Pubmed: 15610358 )

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13460.1 11 Arabidopsis thaliana 0 667 99 99 67 (29) _
AT3G13460.2 11 Arabidopsis thaliana 0 666 99 99 68 (30) _
AT3G13460.3 11 Arabidopsis thaliana 0 496 99 99 58 (24) _
Os03g53670.1 7 Oryza sativa 2E-161 688 45 60 7 (7) _
Os03g06240.1 7 Oryza sativa 3E-161 669 46 61 18 (18) S
Os03g06240.2 7 Oryza sativa 3E-161 670 46 61 18 (18) S
Zm00001eb004420_P006 agpv5 Zea mays 5E-162 673 46 60 0 (0) C
Zm00001eb004420_P004 agpv5 Zea mays 1E-161 662 46 60 0 (0) C
Zm00001eb004420_P003 agpv5 Zea mays 2E-159 614 48 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	YTH(3)
TargetP:	Cytoplasm (Class 2 C0.183; M0.107; S0.109; _0.847)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	666 aa (-cTP 642)
Molecular Weight	72.37 kDA(-cTP )
PI	5.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2214	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2215	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 trap st
2216	Detail								leaf [A. thaliana]	total leaf tissue	Clp P5 st
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2225	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 trap
2239	Detail								seedlings [A. thaliana]	total tissue	gfs9
2267	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 TRAP
2297	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
18814325(cotyledons)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data