PPDB

The Plant Proteome Database

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AT3G13450.1   Transketolase family protein

Lab Annot. DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Mapman: 13.2.4.1 amino acid metabolism.degradation.branched-chain group.shared
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55510.1 11Arabidopsis thaliana035689931 (1)M
AT5G50850.1 11Arabidopsis thaliana1E-693373656562 (348)M
AT1G30120.1 11Arabidopsis thaliana7E-633073855168 (138)C
Os07g07470.1 7Oryza sativa032584956 (6)M
Os09g33500.1 7Oryza sativa8E-69324365637 (37)M
Os09g33500.2 7Oryza sativa1E-68326365635 (35)M
Zm00001eb117100_P001 agpv5Zea mays032785950 (0)M
GRMZM2G037614_P01 3.21Zea mays032785951 (1)M
v1_GRMZM2G037614_P01 4a53Zea mays032785953 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Transket_pyr(1) Transketolase_C(1)
TargetP: Mitochondria (Class 2 C0.100; M0.783; S0.027; _0.077)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 358 aa (-cTP 347)
Molecular Weight 39.42 kDA(-cTP )
PI 5.61(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

14764908(mitochondria-suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help