PPDB

 The Plant Proteome Database

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AT3G13445.1   TATA binding protein 1
Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55520.2 11Arabidopsis thaliana1E-13920093960 (0)_
AT1G55520.1 11Arabidopsis thaliana1E-13920093960 (0)_
AT1G55520.4 11Arabidopsis thaliana1E-13920093960 (0)_
Os03g45410.1 7Oryza sativa4E-13021086900 (0)_
Os10g29660.1 6Oryza sativa3E-12719488940 (0)_
Os12g39070.1 7Oryza sativa1E-12224573760 (0)_
Zm00001eb218190_P001 agpv5Zea mays3E-13720093960 (0)_
v1_GRMZM2G161418_P02 4a53Zea mays3E-13720093962 (2)_
GRMZM2G161418_P02 3.21Zea mays3E-13720093960 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3378(2) DUF4295(2) TBP(2)
TargetP: Cytoplasm (Class 2 C0.173; M0.052; S0.061; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 200 aa (-cTP 120)
Molecular Weight 22.37 kDA(-cTP )
PI 9.66(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help