PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G13410.1   2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55546.1 11Arabidopsis thaliana8E-5410882860 (0)S
Os12g03060.1 7Oryza sativa1E-7630844620 (0)S
Os11g03380.1 7Oryza sativa1E-7530843620 (0)S
Os12g03060.2 7Oryza sativa4E-7430843620 (0)S
v1_GRMZM2G179737_P02 4a53Zea mays1E-7730044602 (2)S
Zm00001eb195780_P003 agpv5Zea mays1E-7730044600 (0)S
Zm00001eb195780_P001 agpv5Zea mays1E-7730044600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP-synt_S1(1)
TargetP: Secreted (Class 1 C0.013; M0.026; S0.966; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 321 aa (-cTP 246)
Molecular Weight 34.99 kDA(-cTP )
PI 4.64(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help