PPDB

The Plant Proteome Database

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AT3G13350.1   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein

Lab Annot.
Mapman: 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G55650.1 11Arabidopsis thaliana3E-9131247650 (0)_
AT1G04880.1 11Arabidopsis thaliana3E-6832141540 (0)_
AT1G76110.1 11Arabidopsis thaliana3E-6732640550 (0)_
Os02g27060.2 7Oryza sativa1E-6228740580 (0)_
Os02g27060.1 7Oryza sativa2E-6228839580 (0)_
Os09g37250.1 7Oryza sativa7E-5628736550 (0)_
Zm00001eb240740_P001 agpv5Zea mays1E-5628838600 (0)_
v1_GRMZM2G024976_P01 4a53Zea mays1E-5628838600 (0)_
GRMZM2G024976_P01 3.21Zea mays1E-5628838600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ARID(1) HMG_box(1) HMG_box_2(1) HMG_box_5(1)
TargetP: Cytoplasm (Class 3 C0.425; M0.022; S0.053; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 319 aa (-cTP 293)
Molecular Weight 36.30 kDA(-cTP )
PI 8.75(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help