PPDB

The Plant Proteome Database

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AT3G13280.1   Putative endonuclease or glycosyl hydrolase

Lab Annot. unknown protein DUF537 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G62850.1 11Arabidopsis thaliana2E-1316533490 (0)_
AT1G01355.3 11Arabidopsis thaliana6E-1215136460 (0)_
AT1G01355.1 11Arabidopsis thaliana2E-1115535450 (0)_
Os07g44320.1 7Oryza sativa7E-1115232480 (0)_
Os12g06560.1 7Oryza sativa8E-1112834490 (0)M
Os11g06680.2 7Oryza sativa4E-0812731480 (0)M
GRMZM5G880632_P01 3.21Zea mays3E-0812429450 (0)M
Zm00001eb328720_P002 agpv5Zea mays4E-0815230460 (0)_
Zm00001eb328720_P001 agpv5Zea mays4E-0815230460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NYN(1)
TargetP: Cytoplasm (Class 4 C0.395; M0.146; S0.039; _0.686)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 383 aa (-cTP 363)
Molecular Weight 42.83 kDA(-cTP )
PI 6.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help