PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT3G13228.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18760.1 11 Arabidopsis thaliana 8E-47 226 42 59 0 (0) _
AT1G18780.1 11 Arabidopsis thaliana 2E-34 338 32 47 0 (0) S
AT2G29840.1 11 Arabidopsis thaliana 4E-30 94 59 73 0 (0) _
Os03g20870.1 7 Oryza sativa 4E-12 75 41 60 0 (0) _
Os08g43480.2 7 Oryza sativa 4E-11 66 42 57 0 (0) M
Os08g43480.1 7 Oryza sativa 5E-11 66 42 57 0 (0) _
v1_GRMZM2G124441_P04 4a53 Zea mays 2E-10 49 44 63 0 (0) _
GRMZM2G124441_P04 3.21 Zea mays 2E-10 49 44 63 0 (0) _
v1_GRMZM2G124441_P03 4a53 Zea mays 2E-10 49 44 63 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_1(2) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3
TargetP:	Cytoplasm (Class 2 C0.070; M0.114; S0.093; _0.894)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	325 aa (-cTP 297)
Molecular Weight	36.43 kDA(-cTP )
PI	4.49(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data