PPDB

PPDB	The Plant Proteome Database

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AT3G13210.1 crooked neck protein%2C putative / cell cycle protein

Lab Annot.

crooked neck protein, cell cycle protein
Mapman: 31.3 cell.cycle

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41770.1 11 Arabidopsis thaliana 0 705 78 83 6 (3) _
AT5G45990.2 11 Arabidopsis thaliana 0 702 76 83 0 (0) _
AT5G45990.1 11 Arabidopsis thaliana 0 689 76 84 0 (0) _
Os05g22260.1 7 Oryza sativa 0 702 63 75 0 (0) _
Os05g22260.2 7 Oryza sativa 0 530 65 77 0 (0) _
Os06g33250.1 7 Oryza sativa 0 539 58 72 0 (0) C
Zm00001eb051990_P001 agpv5 Zea mays 0 701 64 76 0 (0) _
v1_GRMZM2G100448_P01 4a53 Zea mays 0 701 64 76 18 (18) _
GRMZM2G100448_P01 3.21 Zea mays 0 750 59 71 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HAT(8) NRDE-2(7) Suf(6) TPR_14(8) TPR_15(3) TPR_16(2) TPR_17(3) TPR_19(3) TPR_2(
TargetP:	Cytoplasm (Class 2 C0.072; M0.165; S0.026; _0.917)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	657 aa (-cTP 632)
Molecular Weight	78.10 kDA(-cTP )
PI	6.82(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1641	Detail								leaf [A. thaliana]	total tissue	shoot1 mutant
1643	Detail								leaf [A. thaliana]	total leaf tissue	Wild-type
1707	Detail								[A. thaliana]		sht1

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data