PPDB

 The Plant Proteome Database

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AT3G13180.1   NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein
Lab Annot. NOL1/NOP2/sun protein / antitermination NusB domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26600.3 11Arabidopsis thaliana7E-2423234540 (0)C
AT5G55920.1 11Arabidopsis thaliana7E-2423134532 (2)M
AT4G26600.1 11Arabidopsis thaliana8E-2423234540 (0)C
Os09g30100.1 7Oryza sativa046962760 (0)C
Os09g30100.2 7Oryza sativa036767830 (0)C
Os02g49270.1 7Oryza sativa5E-2122533514 (4)C
Zm00001eb101440_P002 agpv5Zea mays047768830 (0)C
AC198353.5_FGP004 3.21Zea mays0486637828 (28)_
v1_AC198353.5_FGP004 4a53Zea mays0486637817 (17)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FtsJ(1) GCD14(1) Met_10(1) Methyltr_RsmB-F(1) Methyltransf_15(1) Methyltransf_25
TargetP: Chloroplast (Class 2 C0.889; M0.277; S0.004; _0.047)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 523 aa (-cTP 459) (-lTP 448)
Molecular Weight 58.34 kDA(-cTP 51.20)(-lTP 49.98)
PI 9.12(-cTP 6.92)(-lTP 6.849)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1175Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1196Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help