PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT3G13170.1   Spo11/DNA topoisomerase VI%2C subunit A protein

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13170.3 11Arabidopsis thaliana02581001000 (0)_
AT3G13170.2 11Arabidopsis thaliana02581001000 (0)_
AT5G02820.1 11Arabidopsis thaliana7E-7135136550 (0)_
Os03g54091.1 7Oryza sativa4E-14035358770 (0)_
Os03g17610.1 7Oryza sativa3E-6727841600 (0)C
Os08g06050.1 7Oryza sativa4E-3328431540 (0)_
v1_GRMZM2G129913_P04 4a53Zea mays1E-15535658770 (0)M
Zm00001eb214790_P005 agpv5Zea mays1E-15535658770 (0)M
GRMZM2G129913_P04 3.21Zea mays1E-15535658770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2220(1) TP6A_N(1)
TargetP: Cytoplasm (Class 2 C0.035; M0.254; S0.130; _0.869)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 337)
Molecular Weight 41.80 kDA(-cTP )
PI 7.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help