PPDB

PPDB	The Plant Proteome Database

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AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G13160.1 11 Arabidopsis thaliana 4E-91 352 42 61 45 (36) M
AT1G55890.1 11 Arabidopsis thaliana 2E-88 331 41 62 24 (13) M
AT1G61870.1 11 Arabidopsis thaliana 2E-48 312 32 55 4 (3) M
Os01g57630.2 7 Oryza sativa 1E-52 332 31 55 0 (0) C
Os01g57630.1 7 Oryza sativa 1E-52 332 31 55 0 (0) C
Os01g57630.3 7 Oryza sativa 1E-52 332 31 55 0 (0) C
GRMZM2G139141_P01 3.21 Zea mays 7E-58 326 32 53 2 (2) C
v1_GRMZM2G139141_P01 4a53 Zea mays 7E-58 326 32 53 1 (1) C
Zm00001eb369740_P001 agpv5 Zea mays 7E-58 326 32 53 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Coatomer_E(1) DUF1884(2) Exog_C(3) Glyco_trans_4_3(3) Mic1(2) MRP-S27(5) PPR(7)
TargetP:	Chloroplast (Class 3 C0.710; M0.237; S0.015; _0.103)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	551 aa (-cTP 453)
Molecular Weight	60.63 kDA(-cTP 49.87)
PI	7.98(-cTP 5.09)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data